Checklist for arXiv submission
My checklist that I use before submitting a manuscript to arXiv. Note: only tested on MacOS.
On local machine
- Make a copy of the document folder
 - Check todo list
 - Check figure placement (some figures may manually need to be moved by changing htpb)
 - Check all acknowledgements (funding agencies, people that contributed, HPC, etc.)
 - Spell / language check (consistent US / UK spelling, consistent choice of hyphenation, consistent captions)
 -  Run 
arxiv_latex_cleaner arxiv_draft --commands_only_to_delete author1Edit author2Edit --comands_to_delete commentCommand1 commentCommand2(this creates a new folder)-  
commands_only_to_deleteis useful for deleting commands surrounding text which should still remain in the manuscript (for instance seeing who made which changes) - Be careful as deleting comments can sometimes change the compile, since they are replaced with a newline
 
 -  
 -  Run 
arxiv_flatten_submission --asset_directory=figures/from inside the newly created directory (see GitHub - davidstutz/arxiv-submission-sanitizer-flattener) - Delete figures directory (since figures are now in the main directory)
 -  Copy to new directory and compile with 
pdflatexthree times -  Compare the pre-comment removal etc. pdf to the new pdf with, for instance, Compare PDF files 
- Should be identical. Sometimes spacing errors occur because of the deletions.
 
 - Check no errors in latex output
 - Check no comments
 
Start upload to arXiv process
- Consult the arXiv submission schedule to decide when to post
 - Choose “arXiv.org perpetual, non-exclusive license” license (for most use cases)
 - Upload the comment-deleted version to arxiv (in a zip is easiest)
 - Compare the arxiv version to the original with the pdf comparer
 -  Copy abstract / title / authors to the metadata of arxiv. 
- Note that some latex might have to be made more simple to be compatible with the arxiv system (look at the preview). Also, arxiv has a character limit for the abstract of 1920 characters.
 
 - Send paper key to coauthors when the paper goes up on the arxiv